Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_39522152_39522891_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

39522152 - 39522891

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GCAATGGGGACAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTCCTTTAATG

Flanking Amino Acid:

IDPETLIYAGRHFGDTTAFQ

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.2

62.7

44.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

47.7

-0.1

1.2

37.4

Minor 5ss

91.5

1.4

1.2

90.9

28.7

Minor BPS

76.2

0.68

1.2

76.64

34.9

Associated Gene:

Gene:

EXO1

Ensembl Gene ID:

ENSAPLG00000015042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015676

39510930 - 39529163

18234