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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39527142_39529002_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39527142 - 39529002

Intron Length:

1861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

GTTGTTGATACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CTTCTCTTACTC

Flanking Amino Acid:

EKLAKGEPTDHYVAFCMKLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

64.6

40.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

71.8

0.49

1.1

65.3

44.8

Minor 5ss

35.2

-1.7

3.3

49.2

41.2

Minor BPS

57.7

0.22

1.6

66.76

39.6

Associated Gene:

Gene:

EXO1

Ensembl Gene ID:

ENSAPLG00000015042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015676

39510930 - 39529163

18234