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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39535897_39536257_F

Intron Information:

Intron Rank:

142795

Intron Class:

major

Intron Phase:

Intron Coordinates:

39535897 - 39536257

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

ATTCATTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTCACTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

67.1

44.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.1

0.74

0.8

76.5

36.6

Minor 5ss

27.5

-2.6

2.9

32.4

42.2

Minor BPS

58.5

0.35

81.53

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023895

39535547 - 39538024

2478