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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39621998_39624931_F

Intron Information:

Intron Rank:

130383

Intron Class:

major

Intron Phase:

Intron Coordinates:

39621998 - 39624931

Intron Length:

2934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTTAT

U12 Branch Point Sequence:

TCTCCCATTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

65.9

0.39

1.2

57.6

41.3

Major PPT

79.8

0.67

0.8

30.4

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

54.7

0.14

70.3

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047366

39621906 - 39665768

43863