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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39625161_39665713_F

Intron Information:

Intron Rank:

130384

Intron Class:

major

Intron Phase:

Intron Coordinates:

39625161 - 39665713

Intron Length:

40553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGACAA

U12 Branch Point Sequence:

TTTTCCTTCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.7

31.8

Major BPS

50.6

0.02

1.2

Major PPT

70.2

0.45

0.8

62.8

33.1

Minor 5ss

31.7

-2.1

2.6

35.1

34.5

Minor BPS

81.4

0.97

1.6

90.55

30.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047366

39621906 - 39665768

43863