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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39880660_39891354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39880660 - 39891354

Intron Length:

10695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTTGTCTATA

Flanking Amino Acid:

KDDGTFYRFQTPYFWPSNCW

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

85.3

0.79

0.7

80.9

31.3

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

45.3

-0.3

2.4

66.56

40.1

Associated Gene:

Gene:

RGS7

Ensembl Gene ID:

ENSAPLG00000014655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046466

39794879 - 39942760

147882

ENSAPLT00000033793

39709682 - 39942760

233079

ENSAPLT00000015310

39709682 - 39942760

233079