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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40096874_40097819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40096874 - 40097819

Intron Length:

946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TTAACAGTAAAT

Flanking Amino Acid:

KLELLQKLCETLKNGSGVMQ

Intron Amino Acid Position:

1330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

84.4

0.77

0.7

80.5

31.5

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

47.1

-0.1

2.3

72.62

43.3

Associated Gene:

Gene:

FMN2

Ensembl Gene ID:

ENSAPLG00000014536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015152

40036582 - 40194316

157735