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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40175198_40192754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40175198 - 40192754

Intron Length:

17557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATTGATA

Flanking Amino Acid:

SAETFPNVFSGRTLLEKLFS

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

73.1

0.52

69.4

36.2

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

59.5

0.29

1.6

70.53

35.8

Associated Gene:

Gene:

FMN2

Ensembl Gene ID:

ENSAPLG00000014536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015152

40036582 - 40194316

157735