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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40212858_40217287_R

Intron Information:

Intron Rank:

135074

Intron Class:

major

Intron Phase:

Intron Coordinates:

40212858 - 40217287

Intron Length:

4430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ACACATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTGCCCAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

70.9

0.47

0.9

66.1

39.7

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

55.8

0.18

2.1

75.88

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023342

40210586 - 40218651

8066