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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40244810_40371285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40244810 - 40371285

Intron Length:

126476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

CTCCCCACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAC

U12 Branch Point Sequence:

TTTCTCCCCACT

Flanking Amino Acid:

SSCVDVLYWTILCQRVTMIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

76.2

34.7

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

0.52

0.8

66.1

28.4

Minor 5ss

36.1

-1.6

3.1

45.8

42.8

Minor BPS

46.2

-0.2

2.2

74.26

42.3

Associated Gene:

Gene:

CHRM3

Ensembl Gene ID:

ENSAPLG00000014510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029868

40242988 - 40501975

258988

ENSAPLT00000048008

40242988 - 40495083

252096

ENSAPLT00000020320

40242988 - 40373234

130247

ENSAPLT00000038555

40242988 - 40421504

178517

ENSAPLT00000015118

40242988 - 40440677

197690

ENSAPLT00000032589

40242988 - 40518889

275902

ENSAPLT00000031953

40242988 - 40459490

216503