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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40371389_40436480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40371389 - 40436480

Intron Length:

65092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTGTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTGTGTTCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.56

68.1

42.3

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

45.5

-0.3

2.4

62.92

43.8

Associated Gene:

Gene:

CHRM3

Ensembl Gene ID:

ENSAPLG00000014510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032589

40242988 - 40518889

275902

ENSAPLT00000031953

40242988 - 40459490

216503

ENSAPLT00000029868

40242988 - 40501975

258988

ENSAPLT00000015118

40242988 - 40440677

197690

ENSAPLT00000048008

40242988 - 40495083

252096