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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40435067_40435453_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40435067 - 40435453

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTCATTTGA

5'SS Class:

weak_major

3'SS Sequence:

AGGAGTAGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

AAATCTAGAACA

Flanking Amino Acid:

RVVWLVPGIHEGYISYRQCQ

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.4

60.8

40.6

Major BPS

75.6

0.64

1.5

34.5

Major PPT

43.3

-0.3

1.2

31.3

39.3

Minor 5ss

37.5

-1.4

2.8

45.7

42.5

Minor BPS

50.2

1.7

62.32

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024000

40434544 - 40435546

1003