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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40436591_40494894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40436591 - 40494894

Intron Length:

58304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAACAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

64.9

Major BPS

84.6

0.86

41.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

31.6

-2.1

3.5

46.9

48.4

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

CHRM3

Ensembl Gene ID:

ENSAPLG00000014510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048008

40242988 - 40495083

252096