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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40643806_40647759_F

Intron Information:

Intron Rank:

124993

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40643806 - 40647759

Intron Length:

3954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CAACCCTGACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TCCTCCTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

31.3

Major BPS

68.5

0.46

75.3

29.8

Major PPT

47.6

-0.1

1.1

36.9

Minor 5ss

50.1

0.01

2.4

63.4

43.4

Minor BPS

66.7

0.61

1.8

79.08

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037290

40643466 - 40648916

5451