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Intron Name: Anas_platyrhynchos_platyrhynchos_3_40808876_40809271_F

Intron Information:

Intron Rank:

142813

Intron Class:

major

Intron Phase:

Intron Coordinates:

40808876 - 40809271

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGGGCA

5'SS Class:

major

3'SS Sequence:

ATTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACTTTTATAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

66.7

39.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

89.8

0.89

0.7

89.4

26.6

Minor 5ss

24.9

-2.9

3.2

30.6

42.7

Minor BPS

63.4

0.5

1.6

78.49

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030328

40808279 - 40809744

1466