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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41004525_41008277_R

Intron Information:

Intron Rank:

130643

Intron Class:

major

Intron Phase:

Intron Coordinates:

41004525 - 41008277

Intron Length:

3753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCAGTTTC

5'SS Class:

major

3'SS Sequence:

CTCTCTCACGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATTTGAAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

73.2

39.3

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

69.6

0.44

0.8

65.8

29.1

Minor 5ss

39.7

-1.2

2.8

45.3

42.7

Minor BPS

44.3

-0.3

2.4

72.6

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032275

41004376 - 41019599

15224