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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41008349_41019577_R

Intron Information:

Intron Rank:

130644

Intron Class:

major

Intron Phase:

Intron Coordinates:

41008349 - 41019577

Intron Length:

11229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

98.8

1.1

0.5

95.2

16.3

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

71.2

0.66

1.5

82.45

31.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032275

41004376 - 41019599

15224