Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_41141622_41152985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41141622 - 41152985

Intron Length:

11364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

CCCATCTTAAAT

Flanking Amino Acid:

DGEEEVKSFEEKEMEKQKLL

Intron Amino Acid Position:

3688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

75.3

35.6

Major BPS

77.8

0.69

78.2

31.8

Major PPT

79.4

0.66

77.7

40.7

Minor 5ss

43.3

-0.7

3.1

56.7

41.8

Minor BPS

0.27

1.5

64.95

45.5

Associated Gene:

Gene:

RYR2

Ensembl Gene ID:

ENSAPLG00000011026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042777

41098073 - 41399991

301919

ENSAPLT00000011580

41098073 - 41403194

305122