Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_41166581_41167874_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41166581 - 41167874

Intron Length:

1294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGCA

5'SS Class:

major

3'SS Sequence:

AATTTGTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATTTATATAATT

Flanking Amino Acid:

IALAKNRFSMKDTEDEVRDI

Intron Amino Acid Position:

3479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.7

37.6

Major BPS

0.72

78.4

31.2

Major PPT

70.3

0.46

1.1

65.3

44.8

Minor 5ss

31.7

-2.1

3.3

37.8

42.2

Minor BPS

59.5

0.38

1.7

80.35

35.2

Associated Gene:

Gene:

RYR2

Ensembl Gene ID:

ENSAPLG00000011026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042777

41098073 - 41399991

301919

ENSAPLT00000039234

41098073 - 41403194

305122

ENSAPLT00000011580

41098073 - 41403194

305122