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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41186107_41188209_R


Intron Information:

Intron Rank:
60

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
41186107 - 41188209

Intron Length:
2103

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTACGGTAT

5'SS Class:
major

3'SS Sequence:
GATGTAATTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
TCTGATGTAATT

Flanking Amino Acid:
YEQEIKFFAKVVLPLIDQYF

Intron Amino Acid Position:
2946

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.8
0.52
1.1
69.6
37.5

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
68.3
0.41
1.1
59.8
44.8

Minor 5ss
39
-1.2
3.6
54.8
44.1

Minor BPS
46.7
-0.1
2.2
67.74
44.1

Associated Gene:

Gene:
RYR2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

41098073 - 41399991
301919

41098073 - 41403194
305122

41098073 - 41403194
305122