Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_41211691_41212167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41211691 - 41212167

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAGGTGCA

5'SS Class:

major

3'SS Sequence:

TAACAAATTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTCTTTTAAAT

Flanking Amino Acid:

PSPSNGSSKTLEMEEQEDDT

Intron Amino Acid Position:

2352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.2

59.3

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

64.6

0.33

55.5

Minor 5ss

34.5

-1.8

3.5

50.4

Minor BPS

66.1

0.58

1.3

79.19

36.4

Associated Gene:

Gene:

RYR2

Ensembl Gene ID:

ENSAPLG00000011026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042777

41098073 - 41399991

301919

ENSAPLT00000011580

41098073 - 41403194

305122