Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_41225163_41225752_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41225163 - 41225752

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAATA

5'SS Class:

strong_major

3'SS Sequence:

GTTCGTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTCTTCATACTT

Flanking Amino Acid:

MKLPEPVKLQMCHLLQYLCD

Intron Amino Acid Position:

1886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.1

80.8

33.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

76.1

0.59

0.9

73.1

37.3

Minor 5ss

42.6

-0.8

57.9

46.3

Minor BPS

48.7

-0

1.9

67.5

44.1

Associated Gene:

Gene:

RYR2

Ensembl Gene ID:

ENSAPLG00000011026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042777

41098073 - 41399991

301919

ENSAPLT00000039234

41098073 - 41403194

305122

ENSAPLT00000011580

41098073 - 41403194

305122