Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_41310420_41311872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41310420 - 41311872

Intron Length:

1453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TGAACTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTCCTCTGAACT

Flanking Amino Acid:

SLWRLETLRVAWSGSHIRWG

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.3

74.1

38.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

68.3

0.41

0.9

65.9

40.5

Minor 5ss

-1.6

2.7

37.8

40.1

Minor BPS

0.64

1.4

82.07

39.1

Associated Gene:

Gene:

RYR2

Ensembl Gene ID:

ENSAPLG00000011026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042777

41098073 - 41399991

301919

ENSAPLT00000039234

41098073 - 41403194

305122

ENSAPLT00000011580

41098073 - 41403194

305122