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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41404879_41501957_R

Intron Information:

Intron Rank:

152971

Intron Class:

major

Intron Phase:

Intron Coordinates:

41404879 - 41501957

Intron Length:

97079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGCGCC

5'SS Class:

major

3'SS Sequence:

CCTATTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CTATTTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.2

58.8

41.9

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

73.3

0.53

73.7

34.6

Minor 5ss

40.5

-1.1

3.4

61.2

43.3

Minor BPS

59.9

0.17

1.5

60.63

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029720

41403968 - 41502575

98608