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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41535207_41536010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41535207 - 41536010

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATTTTTTCATT

Flanking Amino Acid:

WKLANIEETTGIGLTESLAM

Intron Amino Acid Position:

1266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

100

1.24

0.5

100

Major PPT

90.9

0.92

0.6

84.1

30.9

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

55.3

0.25

1.7

71.67

40.4

Associated Gene:

Gene:

MTR

Ensembl Gene ID:

ENSAPLG00000009934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010447

41534881 - 41579678

44798