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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41536204_41537248_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41536204 - 41537248

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGAGGT

5'SS Class:

strong_major

3'SS Sequence:

ACTATATCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TGCACTATATCC

Flanking Amino Acid:

VKALGDRLAEAFAEELHERV

Intron Amino Acid Position:

1202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

40.8

Major BPS

70.8

0.52

70.6

31.6

Major PPT

57.3

0.16

1.1

53.6

40.2

Minor 5ss

31.1

-2.2

3.6

47.6

47.8

Minor BPS

46.2

-0.3

1.9

56.65

41.8

Associated Gene:

Gene:

MTR

Ensembl Gene ID:

ENSAPLG00000009934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010447

41534881 - 41579678

44798