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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41537450_41539821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41537450 - 41539821

Intron Length:

2372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAATGA

5'SS Class:

major

3'SS Sequence:

CTTTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATTT

Flanking Amino Acid:

IAKFHGLRQQAEKDSACTDP

Intron Amino Acid Position:

1135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

62.2

39.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.4

0.82

0.7

85.8

27.2

Minor 5ss

35.6

-1.6

3.3

47.9

47.5

Minor BPS

56.7

0.29

1.6

70.13

42.3

Associated Gene:

Gene:

MTR

Ensembl Gene ID:

ENSAPLG00000009934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010447

41534881 - 41579678

44798