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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41540847_41542632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41540847 - 41542632

Intron Length:

1786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGATTCCTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AATTCCTTCATG

Flanking Amino Acid:

HNDWLSGHKPVKPKFIGTKV

Intron Amino Acid Position:

1017

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

84.1

30.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.7

0.67

0.9

73.3

37.1

Minor 5ss

39.2

-1.2

2.8

46.3

Minor BPS

62.6

0.25

1.8

66.95

Associated Gene:

Gene:

MTR

Ensembl Gene ID:

ENSAPLG00000009934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010447

41534881 - 41579678

44798