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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41543609_41544360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41543609 - 41544360

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GCATTCTCATTT

Flanking Amino Acid:

VLDASKSVVVCSQLLDESVK

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

76.2

33.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

96.1

1.04

0.5

95.6

14.9

Minor 5ss

45.4

-0.5

2.8

65.7

39.3

Minor BPS

47.6

-0.1

1.8

61.22

42.9

Associated Gene:

Gene:

MTR

Ensembl Gene ID:

ENSAPLG00000009934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010447

41534881 - 41579678

44798