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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41544443_41546161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41544443 - 41546161

Intron Length:

1719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTTTCATT

Flanking Amino Acid:

PLLIGGATTSKTHTAVKIAP

Intron Amino Acid Position:

931

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.5

27.4

Major BPS

100

1.24

0.5

100

Major PPT

0.67

84.6

29.1

Minor 5ss

41.3

-1

3.1

56.6

Minor BPS

60.5

0.41

1.7

78.3

39.3

Associated Gene:

Gene:

MTR

Ensembl Gene ID:

ENSAPLG00000009934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010447

41534881 - 41579678

44798