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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41560759_41561807_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41560759 - 41561807

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGCCTT

5'SS Class:

weak_major

3'SS Sequence:

ATCTCTTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTGTTTTGAATC

Flanking Amino Acid:

AKLIMAGNYEEALSVAKMQV

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

68.1

42.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

79.5

0.66

0.7

77.9

30.2

Minor 5ss

55.7

0.19

2.7

73.9

36.3

Minor BPS

63.2

0.39

1.4

70.2

35.7

Associated Gene:

Gene:

MTR

Ensembl Gene ID:

ENSAPLG00000009934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010447

41534881 - 41579678

44798