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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41571995_41572879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41571995 - 41572879

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TTGTTGGTAACT

Flanking Amino Acid:

AQADYGLEHLVYRLNRVSAE

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

0.55

1.1

63.4

44.3

Major PPT

67.6

0.4

58.1

47.3

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

49.3

0.03

2.6

78.77

43.9

Associated Gene:

Gene:

MTR

Ensembl Gene ID:

ENSAPLG00000009934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010447

41534881 - 41579678

44798