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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41596427_41598575_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41596427 - 41598575

Intron Length:

2149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGGAA

5'SS Class:

major

3'SS Sequence:

AATTCTCTGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

SLGQVGNDLQGEAEFARIMS

Intron Amino Acid Position:

787

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.6

37.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

59.3

0.21

1.2

60.4

39.8

Minor 5ss

26.5

-2.7

3.7

36.6

47.9

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

ACTN2

Ensembl Gene ID:

ENSAPLG00000008618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009119

41594701 - 41660721

66021