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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41608598_41608960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41608598 - 41608960

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTCTGATTT

Flanking Amino Acid:

FIVHSIEEIQSLISAHDQFK

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

83.8

27.2

Major BPS

100

1.24

0.5

100

Major PPT

80.2

0.68

0.8

78.3

34.8

Minor 5ss

33.7

-1.9

3.4

48.7

47.5

Minor BPS

58.1

0.33

1.7

77.22

39.5

Associated Gene:

Gene:

ACTN2

Ensembl Gene ID:

ENSAPLG00000008618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030387

41594701 - 41660751

66051

ENSAPLT00000009119

41594701 - 41660721

66021