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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41631336_41637901_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41631336 - 41637901

Intron Length:

6566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCACCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAA

Flanking Amino Acid:

GVKLVSIGAEEIVDGNVKMT

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

27.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.9

0.67

0.7

79.2

Minor 5ss

46.4

-0.4

2.5

62.6

42.2

Minor BPS

69.4

0.6

1.3

77.65

32.3

Associated Gene:

Gene:

ACTN2

Ensembl Gene ID:

ENSAPLG00000008618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030387

41594701 - 41660751

66051

ENSAPLT00000009119

41594701 - 41660721

66021