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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41678056_41678577_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41678056 - 41678577

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAGTAC

5'SS Class:

major

3'SS Sequence:

TCACCATGGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

ACTCTCTTCACC

Flanking Amino Acid:

HKWHWLDPIRKPGVPLARGT

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

63.3

37.9

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

48.5

-0

1.2

47.9

38.5

Minor 5ss

35.9

-1.6

3.3

40.9

45.9

Minor BPS

56.5

0.19

1.8

65.52

40.2

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259