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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41678680_41679264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41678680 - 41679264

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGTTTTT

5'SS Class:

major

3'SS Sequence:

TTCTCTTATCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

CTTCTCTTATCC

Flanking Amino Acid:

ICRLVAKSVKVFSELPGNSA

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

72.8

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

83.7

0.76

0.8

77.2

36.1

Minor 5ss

41.2

-1

3.1

59.1

45.4

Minor BPS

62.1

0.36

1.6

71.17

40.3

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259