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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41681428_41682262_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41681428 - 41682262

Intron Length:

835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCATTCTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TATTACTCATTC

Flanking Amino Acid:

LVCSIMKYDAEEQEESEERE

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

77.9

0.63

0.8

77.1

31.3

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

49.1

-0

1.9

65.14

40.3

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259