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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41682857_41683292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41682857 - 41683292

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

CTCTGTGGAAAA

Flanking Amino Acid:

LLPLIRLLERKYPKALDAVL

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

29.6

Major BPS

75.5

0.63

1.1

34.4

Major PPT

72.7

0.51

1.1

68.8

41.9

Minor 5ss

43.2

-0.7

2.7

54.4

36.6

Minor BPS

38.2

-0.9

2.3

48.41

42.6

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259