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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41686910_41687182_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41686910 - 41687182

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TCCATTGGAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTTTTCCATT

Flanking Amino Acid:

LHPLLKGWPEALQAAIKSSK

Intron Amino Acid Position:

645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

57.2

0.16

53.6

40.3

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

53.3

0.19

1.9

79.05

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259