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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41687305_41687792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41687305 - 41687792

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATGTGCG

5'SS Class:

major

3'SS Sequence:

TTCCATTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTGTTTTTCATG

Flanking Amino Acid:

SGDPSLLLQTVDDLILVAEK

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.1

56.5

Major BPS

100

1.24

0.5

100

Major PPT

68.4

0.41

66.9

38.1

Minor 5ss

41.3

-1

3.1

55.3

Minor BPS

53.3

-0

1.8

61.75

41.5

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259