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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41689367_41689659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41689367 - 41689659

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TGATTTATAACT

Flanking Amino Acid:

HLKPPPSFPKEQTWWNPESL

Intron Amino Acid Position:

814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

81.3

32.8

Major BPS

77.9

0.69

78.3

31.3

Major PPT

91.3

0.93

0.5

92.5

17.5

Minor 5ss

31.8

-2.1

3.6

48.2

47.9

Minor BPS

62.4

0.47

1.6

78.23

37.7

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259