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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41689809_41691922_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41689809 - 41691922

Intron Length:

2114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTATTT

5'SS Class:

major

3'SS Sequence:

ATTTACATGTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTATTTACAT

Flanking Amino Acid:

YRALMNLLLKVHVKDSEVLF

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

76.1

33.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

0.18

1.2

62.3

42.6

Minor 5ss

50.2

0.01

2.8

73.9

42.5

Minor BPS

58.7

0.35

1.9

82.06

39.2

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259