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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41692116_41692618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41692116 - 41692618

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGTAA

5'SS Class:

major

3'SS Sequence:

ACTCTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TTTCCCTCACTC

Flanking Amino Acid:

KKQLLSPPSPVVISLLINLG

Intron Amino Acid Position:

928

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

70.3

31.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

85.4

0.8

79.7

31.7

Minor 5ss

29.9

-2.3

3.3

37.1

47.5

Minor BPS

0.2

1.8

72.19

39.1

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259