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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41696512_41697517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41696512 - 41697517

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAAATAA

5'SS Class:

major

3'SS Sequence:

CTTACCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

ATATCCTGATTA

Flanking Amino Acid:

QTRRQKMQQQKKPQDAELAP

Intron Amino Acid Position:

1202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

29.8

Major BPS

70.4

0.51

67.1

39.4

Major PPT

77.9

0.63

0.8

69.6

36.5

Minor 5ss

38.3

-1.3

3.2

46.9

43.1

Minor BPS

56.8

0.21

1.7

67.86

38.4

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259