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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41698937_41700280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41698937 - 41700280

Intron Length:

1344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

CTTTTTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTCTTTTTATT

Flanking Amino Acid:

LLGAVAGMFPDKVLHNIMPI

Intron Amino Acid Position:

1331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.8

0.87

0.7

81.4

34.9

Minor 5ss

40.4

-1.1

2.9

61.4

42.9

Minor BPS

55.6

0.26

1.6

73.31

37.6

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259