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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41701087_41703021_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41701087 - 41703021

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGACTA

5'SS Class:

major

3'SS Sequence:

AAACTATAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCCTTTTAAACT

Flanking Amino Acid:

TVTATSSTDKDAVLEADTEF

Intron Amino Acid Position:

1451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

72.9

38.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

55.1

0.12

1.1

48.8

42.2

Minor 5ss

31.9

-2.1

39.9

45.5

Minor BPS

60.5

0.41

1.7

74.22

43.6

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259