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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41704156_41704713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41704156 - 41704713

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTACG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTAAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTCTAAACC

Flanking Amino Acid:

LLTSQSLVKKIVECEETEEL

Intron Amino Acid Position:

1549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.3

37.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.3

0.46

64.2

40.6

Minor 5ss

36.1

-1.6

2.6

43.8

43.3

Minor BPS

69.5

0.59

1.6

77.35

39.1

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259