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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41707697_41708009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41707697 - 41708009

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

GATTTCCTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

TTTTTCTGGATT

Flanking Amino Acid:

SPYLMDCLLQVVRLERIVVE

Intron Amino Acid Position:

1800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

38.4

Major BPS

0.47

69.9

32.6

Major PPT

66.6

0.37

62.2

39.6

Minor 5ss

34.1

-1.8

3.2

46.7

48.6

Minor BPS

70.2

0.72

1.4

87.21

31.9

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259