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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41709070_41709284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41709070 - 41709284

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGTGT

5'SS Class:

major

3'SS Sequence:

TTAATTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CGTTTTTTAATT

Flanking Amino Acid:

ALDFRTEHAQDDLEEVGKTE

Intron Amino Acid Position:

1898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.3

61.3

45.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.5

0.8

80.1

37.1

Minor 5ss

42.6

-0.8

3.5

64.5

46.9

Minor BPS

0.77

1.2

79.54

37.3

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259